The analysis tab provides a range of options for analysis of your image data.
Your data to be viewed in the following ways:
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Show Intensity Profile |
Toggles the display of an intensity line profile view of the selected overlay for the current image data |
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Show Region Intensity Histogram |
Toggles the display of an Intensity histogram view of the current image data |
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Show Through-series Analysis |
Toggles the display of a through-series analysis view of the current image data |
The following options are available:
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Export Graph view to Clipboard |
Exports the current view of the graph to the clipboard. |
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Export graph view to an image file |
Export the current view of the graph as an image file in the following formats: JPG, Bitmap, PNG. |
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Adjust Axes |
Manually adjust the scale of the x and y axes to best match your data. |
Intensity Profile Graph
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Always Auto Range: When Always Auto Range is enabled, the scale of the axes will continuously adjust to best match the current data.
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Auto Range: Use the one touch auto range button to perform a one off auto range for the current graph.
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Background: Set the background colour of the graph from the available colour palette options.
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Show a graph per channel/Show one graph for all channels: Choose whether to view data for each channel on separate graphs or combined in one graph view.
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Show/Hide Legend: Show or hide the legend for the graph.
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more: View the Intensity profile data in tabular format.
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Copy to Clipboard: Copy the data (including metadata) to the clipboard
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Export to File: Export the data (including metadata) as a CSV file.
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Region Intensity Histogram
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Display using Logarithmic scale: Set the y-axis to logarithmic format.
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Always Auto Range: When Always Auto Range is enabled, the scale of the axes will continuously adjust to best match the current data.
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Auto Range: Use the one touch auto range button to perform a one off auto range for the current graph.
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Background: Set the background colour of the graph from the available colour palette options.
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Show a graph per channel/Show one graph for all channels: Choose whether to view data for each channel on separate graphs or combined in one graph view.
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Show/Hide Legend: Show or hide the legend for the graph.
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more: View the Region Intensity Histogram Statistics and Data in tabular format
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Copy to Clipboard: Copy the data (including metadata) to the clipboard
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Export to File: Export the data (including metadata) as a CSV file.
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Through Series Analysis
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Display using Logarithmic scale: Set the y-axis to logarithmic format.
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Always Auto Range: When Always Auto Range is enabled, the scale of the axes will continuously adjust to best match the current data.
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Auto Range: Use the one touch auto range button to perform a one off auto range for the current graph.
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Max/Min: Plot a through series for the frame Max and Min values
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Background: Set the background colour of the graph from the available colour palette options.
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Show a graph per channel/Show one graph for all channels: Choose whether to view data for each channel on separate graphs or combined in one graph view.
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Show/Hide Legend: Show or hide the legend for the graph.
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more: View the through series analysis data in tabular format
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Time Series: View the data as a time series
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Z-stack: View the data as a graph of the Z-stack.
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Filter Outlier Pixels: Check the box to filter pixels within the top and bottom 1% of intensity from the data.
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Start Analysis: Start analysis for the currently selected options
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Auto Analyse: Check the box to automatically analyse data and update the graph as options are changed.