Analysis Tab

The analysis tab provides a range of options for analysis of your image data.

Your data to be viewed in the following ways:

Show Intensity Profile	Toggles the display of an intensity line profile view of the selected overlay for the current image data
Show Region Intensity Histogram	Toggles the display of an Intensity histogram view of the current image data
Show Through-series Analysis	Toggles the display of a through-series analysis view of the current image data

The following options are available:

Export Graph view to Clipboard	Exports the current view of the graph to the clipboard.
Export graph view to an image file	Export the current view of the graph as an image file in the following formats: JPG, Bitmap, PNG.
Adjust Axes	Manually adjust the scale of the x and y axes to best match your data.

Always Auto Range: When Always Auto Range is enabled, the scale of the axes will continuously adjust to best match the current data.
Auto Range: Use the one touch auto range button to perform a one off auto range for the current graph.
Background: Set the background colour of the graph from the available colour palette options.
Show a graph per channel/Show one graph for all channels: Choose whether to view data for each channel on separate graphs or combined in one graph view.
Show/Hide Legend: Show or hide the legend for the graph.
more: View the Intensity profile data in tabular format.
- Copy to Clipboard: Copy the data (including metadata) to the clipboard
- Export to File: Export the data (including metadata) as a CSV file.

Region Intensity Histogram

Display using Logarithmic scale: Set the y-axis to logarithmic format.
Always Auto Range: When Always Auto Range is enabled, the scale of the axes will continuously adjust to best match the current data.
Auto Range: Use the one touch auto range button to perform a one off auto range for the current graph.
Background: Set the background colour of the graph from the available colour palette options.
Show a graph per channel/Show one graph for all channels: Choose whether to view data for each channel on separate graphs or combined in one graph view.
Show/Hide Legend: Show or hide the legend for the graph.
more: View the Region Intensity Histogram Statistics and Data in tabular format
- Copy to Clipboard: Copy the data (including metadata) to the clipboard
- Export to File: Export the data (including metadata) as a CSV file.

Display using Logarithmic scale: Set the y-axis to logarithmic format.
Always Auto Range: When Always Auto Range is enabled, the scale of the axes will continuously adjust to best match the current data.
Auto Range: Use the one touch auto range button to perform a one off auto range for the current graph.
Max/Min: Plot a through series for the frame Max and Min values
Background: Set the background colour of the graph from the available colour palette options.
Show a graph per channel/Show one graph for all channels: Choose whether to view data for each channel on separate graphs or combined in one graph view.
Show/Hide Legend: Show or hide the legend for the graph.
more: View the through series analysis data in tabular format

Time Series: View the data as a time series

Z-stack: View the data as a graph of the Z-stack.

Filter Outlier Pixels: Check the box to filter pixels within the top and bottom 1% of intensity from the data.

Start Analysis: Start analysis for the currently selected options

Auto Analyse: Check the box to automatically analyse data and update the graph as options are changed.